call_timbr: Call timbr for use on cluster

In fboehm/qtl2effects: Tools for Allele Effects at Established Quantitative Trait Loci

Description

Call timbr for use on cluster

Usage

call_timbr(
  input_vec,
  traits_df,
  addcovar = NULL,
  prior_M,
  genoprobs_array,
  A_matrix = mcv.data$prior.D$A
)

Arguments

input_vec	a vector containing two named components, probe and trait
traits_df	a data.frame with one trait per column and column name corresponding to trait name
addcovar	additive covariates matrix to be appended to a column of 1's.
prior_M	prior_M input for TIMBR::TIMBR()
genoprobs_array	a n by 36 by m array of genotype probabilities, where n is the number of subjects and m the number of markers

Value

output (a named list) of a single call to TIMBR

fboehm/qtl2effects documentation built on Sept. 20, 2021, 7:34 p.m.