analyse_trscr_cnv: A Function Analyses CNV and Transcriptome data

Description Usage Arguments

Description

This function analyses methylome data.

Usage

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analyse_trscr_cnv(gene, trscr_res, cnv_res, meth_idx, ctrl_idx, cols, idxes,
  PLOT = TRUE)

Arguments

gene

A vector describing the gene (line of a bed file).

trscr_res

A vector of expression values.

cnv_res

A vector of CN values.

meth_idx

A vector of sample for which methylom analysis is available.

ctrl_idx

A vector of sample used to define threshold

cols

A color vectors indexed by by samples names.

idxes

A list of index defining sample groups.

PLOT

A boolean defining if graphical output must be dispayed on the graphical output.


fchuffar/methmybeachup documentation built on May 16, 2019, 12:07 p.m.