check_marker_allele_prop: A Function That Checks Proportion of Allele for each Marker

In fchuffar/ptlmapper: Useful genetic tool allowing to discriminate individuals by comparing the distribution of their phenotype and to map the genetic loci responsible for specific distributions

A Function That Checks Proportion of Allele for each Marker

Description

This function checks the proportion of allele for each marker. It discard marker that does not repsect the minimal proportion for an allele.

Usage

check_marker_allele_prop(genodata, bckg, min_prop = 0.1)

Arguments

genodata	A matrix describing the genotype of individuals.
bckg	Vector of character describing the individuals as they are describe in genodata.
min_prop	A numeric specifying the minimal proportion of each parental allele under which a marker is discard from the analysis.

fchuffar/ptlmapper documentation built on March 27, 2024, 3:28 p.m.