Files in federicomarini/pcaExplorer

Interactive Visualization of RNA-seq Data Using a Principal Components Approach

.Rbuildignore

.github/workflows/R-CMD-check.yaml

CODE_OF_CONDUCT.md

DESCRIPTION

LICENSE

LICENSE.md

NAMESPACE

NEWS.md R/correlatePCs.R R/distro_expr.R R/genespca.R R/get_annotation.R R/hi_loadings.R R/makeds.R R/pair_corr.R R/pca2go.R R/pcaExplorer-pkg.R R/pcaExplorer.R R/pcaplot.R R/profile_explore.R R/zzz.R README.md

_pkgdown.yml

inst/CITATION

inst/extdata/about.md inst/extdata/datainput.md inst/extdata/instructions.md inst/extdata/instructions_unr.md inst/extdata/reportTemplate.Rmd

inst/www/help_dataformats.png

inst/www/pcaExplorer.png

man/correlatePCs.Rd man/distro_expr.Rd

man/figures/pcaExplorer.png

man/geneprofiler.Rd man/genespca.Rd man/get_annotation.Rd man/get_annotation_orgdb.Rd man/hi_loadings.Rd man/limmaquickpca2go.Rd man/makeExampleDESeqDataSet_multifac.Rd man/pair_corr.Rd man/pca2go.Rd man/pcaExplorer-pkg.Rd man/pcaExplorer.Rd man/pcaplot.Rd man/pcaplot3d.Rd man/pcascree.Rd man/plotPCcorrs.Rd man/topGOtable.Rd tests/testthat.R tests/testthat/test_correlatePCs.R tests/testthat/test_hiloadings.R tests/testthat/test_makeDS.R tests/testthat/test_pca2go.R tests/testthat/test_pcagenes.R tests/testthat/test_pcasamples.R tests/testthat/test_shiny.R

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vignettes/newsnap_02_instructions.png

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vignettes/newsnap_04_overview.png

vignettes/newsnap_05_samples.png

vignettes/newsnap_06_genes.png

vignettes/newsnap_07_finder.png

vignettes/newsnap_08_pca2go.png

vignettes/newsnap_09_multifac.png

vignettes/newsnap_10_editor.png

vignettes/newsnap_11_about.png

vignettes/pcaExplorer.Rmd

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vignettes/unr_01_splom.png

vignettes/unr_02_sts_heatmap.png

vignettes/unr_03_summary_counts.png

vignettes/unr_04a_samplespca.png

vignettes/unr_04b_samples_dex.png

vignettes/unr_05_loadings.png

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vignettes/unr_07_genespca.png

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vignettes/upandrunning.Rmd

federicomarini/pcaExplorer documentation built on April 8, 2024, 3:15 a.m.