Files in femeunier/LidarED

.Rbuildignore
.gitignore
DESCRIPTION
Figures_old/AGB.png
Figures_old/CA_old.png
Figures_old/H.png
Figures_old/comp_H.png
Figures_old/dbh.png
LidarED.Rproj
NAMESPACE
R/ED2_utils.R R/allometry_utils.R R/get_ED_default_pft.R R/inventory_processing.R R/make_IC_ED2.R R/patchnumber2boundaries.R R/read.fluxes.Q.R R/read.fluxes.R R/sample.allom.R R/sample.params.R R/sample.try.R R/utils.R README.md
data/FLUXCOM_ANN_GPP_2006-2013_Wytham.rds
data/Flux+Tower+AWS+data+2012+to+2018.gnumeric
data/Flux+Tower+AWS+data+2012+to+2018.xls
data/Fluxdata.month.RDS
data/Fluxes_data.png
data/Fluxtower.RDS
data/Fluxtower.csv
data/Fluxtower_extrap.RDS
data/Fluxtower_monthly.RDS
data/Wytham.OP.RDS
data/Wytham.OP2.RDS
data/Wytham.OP3.RDS
data/Wytham.xml
data/Wytham/Figures/BCI/povray/BCI-2004-01.png
data/Wytham/Figures/DAH-grass/povray/DAH-grass-2015-01.png
data/Wytham/Figures/Wytham/povray/Wytham-1500-01.png
data/Wytham/Figures/paracou/povray/paracou-1500-01.png
data/Wytham/Wytham_.lat51.780lon-1.340.css
data/Wytham/Wytham_.lat51.780lon-1.340.pss
data/Wytham_census_formatted.csv
data/Wytham_nodead.csv
data/Wytham_trees_summary_ED2.csv
data/Wytham_trees_summary_ED2_add.csv
data/Wytham_trees_summary_ED2_noDead.csv
data/Wytham_trees_summary_ED2_noDead.xlsx
data/Wytham_trees_summary_ED2_nodead_add.csv
data/all_configs.RDS
data/df_params_Wytham.RDS
data/params.errors.RDS
data/pecan.xml
data/species
inputs/Inventory/ED2IN
inputs/Inventory/config.xml
inputs/NBG/ED2IN
inputs/NBG/config.xml
inputs/TLS/ED2IN
inputs/TLS/config.xml
man/dbh2agb_exp.Rd man/dbh2bd.Rd man/dbh2bl.Rd man/dbh2ca.Rd man/dbh2h.Rd man/extremum.Rd man/get_ED_default_pft.Rd man/hello.Rd man/patchnumber_from_position.Rd
outputs/Wytham-Q-2005-01-00-000000-g01.h5
outputs/Wytham-Q-2005-04-00-000000-g01.h5
outputs/Wytham-Q-2005-05-00-000000-g01.h5
outputs/Wytham-Q-2005-07-00-000000-g01.h5
outputs/Wytham-Q-2005-08-00-000000-g01.h5
outputs/Wytham-Q-2007-01-00-000000-g01.h5
outputs/Wytham.RData
outputs/WythamPFT-Q-2007-01-00-000000-g01.h5
outputs/analysis.RData
outputs/df.OP.NBG.RDS
outputs/df.OP.verticalLAI.RDS
outputs/df.Wytham.ensemble.RDS
outputs/df.Wytham.ensembles.RDS
outputs/inputs.ensembles.RDS
outputs/saved/Wytham.RData
outputs/saved/analysis.RData
outputs/saved/df.Wytham.ensemble.RDS
outputs/saved/df.Wytham.ensembles.RDS
outputs/saved/inputs.ensembles.RDS
scripts/Add_Hmean.R scripts/Carbon_Cycle.R scripts/Figure_DBHs_corr.R scripts/Figure_NBG.R scripts/Figure_SA.R scripts/Figure_distributions.R scripts/Figure_fit.R scripts/Figure_povray_data.R scripts/Figure_scheme_Allom.R scripts/Figure_size_dis.R scripts/Figure_sizedis.R scripts/Figure_sizedis_NBG.R scripts/Figure_vardec.R scripts/Figure_vardec2.R scripts/Figure_verticalLAI.R scripts/Figures_param_and_data.R scripts/Figures_param_and_data_PFT.R scripts/SA_costfunction.R scripts/VarDecAGB.R scripts/VarianceDecomposition.R scripts/allometry.r scripts/analyze_NBG_histo.R scripts/analyze_outputs_ensemble.R scripts/analyze_outputs_ensembles.R scripts/analyze_verticalLAI.R scripts/check.single.simu.R scripts/clean.OP.R scripts/comp.AGB.Bl.R scripts/compare_simulation.R scripts/compare_simulation_monthly.R scripts/compute_Table6.R scripts/create_census_fileED.R scripts/explore_MET.R scripts/explore_TRY.R scripts/explore_data.R scripts/explore_data_Fluxtower.R scripts/figure_corr_dbh.R scripts/footprint_tower.R scripts/generate_all_ICs.R scripts/generate_allom_uncertainties.R scripts/generate_allometries.R scripts/generate_ensembles.R scripts/generate_scenario_IC.R scripts/generate_scenario_IC_params.R scripts/generate_scenarios.R scripts/kill.runs.R scripts/make_bioinit.r scripts/model.data.comp.R scripts/monthly_fluxdata.R
scripts/pft_allom_table.csv
scripts/plot_AGBandLAI.R scripts/plot_ensemble.R scripts/plot_ensembles.R scripts/plot_posteriors.R scripts/plot_povray.r scripts/read_and_plot_fluxdata.R scripts/recreate_OP.dir.R scripts/restart.to.write.tfiles.R scripts/scp_Qfiles.R scripts/scp_Tfiles.R
scripts/scp_Tfiles.Rout
scripts/scp_results.R
scripts/scp_results.Rout
scripts/test_generate_ensembles.R scripts/workflow_pecan.R
femeunier/LidarED documentation built on April 2, 2022, 3:28 a.m.