ToxTable_categories: Generate a prettyTable of worst toxicity by category.

In finite2/robustToxicities: Toxicity tables

Description

This is a wrapper for the table_values function in prettyTables for worst grade by category. Note that there is an alternative version of this table ToxTable_category which formats similarly to all the other objects in this package.

Usage

ToxTable_categories(rt, categoryList = NULL, strata.count = TRUE,
  overall = TRUE, count = "n", round = 0)

Arguments

rt	RobustToxicitiesClass object
categoryList	A list of categories. Default is all. A subset is selected by changing this value.
strata.count	TRUE/FALSE for displaying strata counts at the top of each column
overall	TRUE/FALSE for including an overall column
count	"n","miss" or "none" providing the counts, missing values or omitting for each column for numeric variables
round	A value or vector for the number of significant figures to report the data to categoryList can be replaced by other column names if the standard categorisation is not being used. For more flexibility you can view the code by typing table_tox_categories. Available methods and values for Type: "miqr" median (Q25,Q75) "miqrr" median (Q25,Q75)[min,max] "mrng" median (Q0,Q100) "avsd" mean (sd) "avci" mean (confidence interval) "st" count "str" count/total "stp" count (percent) "strp" count/total (percent)

Value

Returns a data.frame

finite2/robustToxicities documentation built on May 16, 2019, 12:54 p.m.