API for fintzij/augSIR
Estimation of stochastic SIR epidemic parameters via Bayesian data augmentation.

Global functions
SIRsim Source code
SIRsim_extended Source code
accept_prob Source code
accept_prob_param_MH Source code
augSIR Man page Source code
augSIR-package Man page
build_countmat Source code
build_irm Source code
buildtpm Source code
bwd Source code
calc_loglike Source code
check_count_obs_mats Source code
check_subj_pop_mats Source code
checkpossible Source code
draw_eventtimes Source code
draw_path Source code
draw_subseq Source code
drawtime Source code
emit_seq Source code
evaluate_priors Source code
expit Source code
find.pprior Source code
find.rateprior Source code
fwd Source code
get_W_other Source code
get_Xcount_other Source code
getpath Source code
infec_durs Source code
infec_rate Source code
initializeX Source code
insertRow Source code
irm_decomp Source code
logit Source code
normalize Source code
obs_prob Source code
path_prob Source code
pop_prob Source code
propose_params Source code
rcpp_hello_world Man page Source code
recov_rate Source code
rjmcmc_draw Source code
rjmcmc_ratio Source code
sim_one_SIR Source code
sim_one_tpms Source code
tpm_seq Source code
updateW Source code
updateX Source code
update_Xcount Source code
update_eigen Source code
update_irm Source code
update_prior_prob Source code
update_prob Source code
update_rates Source code
update_rates2 Source code
fintzij/augSIR documentation built on May 14, 2017, 1:19 a.m.