NEWS.md

In floriandeboissieu/biodivMapR: biodivMapR: an R package for a- and ß-diversity mapping using remotely-sensed images

biodivMapR v1.6.2

Fixes

• added importFrom raster brick in function extract.big_raster

biodivMapR v1.6.1

Fixes

• Fixed bug when calling file.edit from linux terminal. initial parameter editor='internal' is not cross platforms. removed it.

biodivMapR v1.6.0

Changes

• Added option to directly compute alpha and beta diversity maps from classification maps, even if it does not correspond to SpectralSpecies file produced from biodivMapR

Fixes

• Fixed bug occuring when calling function diversity_from_plots if no functional duversity map was produced before

biodivMapR v1.5.1

Fixes

• Fixed bug occuring when writing image if initial raster is not a multiple of the window size. no bug occur but the raster files have wrong information
• fixed problem when performing estimation of biodiversity for plots outside of the raster: now the value is NA

biodivMapR v1.5.0

Changes

• Added functional diversity metrics
• updated example script
• updated vignette

biodivMapR v1.4.0

Changes

• implemented MNF
• discarded HDR as input variable from get_random_subset_from_image
• updated example file
• added contribution of F de Boissieu
• changed email address to teledetection.fr
• updated diversity_from_plots
• updated example script

biodivMapR v1.3.1

Fixes

• fixed identification and elimination of pixel samples with NA
• fixed bug occuring when input raster is BSQ interleave, and BSQ reported in PC file and following files

Changes

• finalized preparation for MNF
• improved information in the header files

biodivMapR v1.3.0

Changes

• integrated stars package in order to read any file format, including TIFF format
• developed a generic function to write rasters
• prepared for MNF
• changed default red band for the computation of NDVI: closest band to 690 nm is now selected instead of closest band to 700 nm

biodivMapR v1.2.1

Changes

• added option to convert the mask file into proper format with raster2BIL

biodivMapR v1.2.0

Fixes

• fixed bug raised when processing data over large number of pixels (image products >2^31 bits)
• fixed bug by adding elimination of bands disturbed by water vapor even when ContinuumRemoval set to FALSE

Changes

• Changed name of default directory when saving image after calling raster2BIL
• added documentation for raster data conversion using raster2BIL

biodivMapR v1.1.0

Fixes

• fixed bug in Lib_MapSpectralSpecies: remove constant bands from Subset$DataSubset if needed
• fix bug when continuum removal applied on pixels with constant values which were not filtered in previous stages

Changes

• Updated continuum removal
• Named Continuum_Removal instead of CR
• corrected documetation for perform_radiometric_filtering
• Added an error report when spectral information is not conform with expectations (due to too high noise level for example, usually leading to NaN or Inf values after PCA)
• Changed name for some variables in internal functions for consistency
• will add documentation on how to analyze error reports

biodivMapR v1.0.2

Fixes

Changes

• moved examples to repository root: example files are not installed with package anymore.
• removed Plots reprojection from diversity_from_plots: now, Plots and Raster must be in the same projection. Changed example Plots projection accordingly.
• removed get_projection (useless)

biodivMapR v1.0.1 (Release date: 2019-09-27)

• Added NEWS.md
• Updated README.md: transfered from gitlab.irstea to github
• changed return() into return(invisible())
• updated vignettes & tutorial with latest outputs and figures from code

biodivMapR v1.0.0 (Release date: 2019-09-26)

First release in GitHub Submission accepted to Methods in Ecology and Evolution

floriandeboissieu/biodivMapR documentation built on March 11, 2021, 8:46 a.m.