FLom-class: A class for an operating model (OM)

In flr/mse: Tools for Running Management Strategy Evaluations using FLR

A class for an operating model (OM)

Description

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Usage

FLom(...)

FLom(...)

## S4 method for signature 'FLom'
stock(object)

## S4 replacement method for signature 'FLom,FLStock'
stock(object) <- value

## S4 method for signature 'FLom'
sr(object)

## S4 replacement method for signature 'FLom,FLSR'
sr(object) <- value

## S4 method for signature 'FLom,FLom'
combine(x, y, ...)

## S4 replacement method for signature 'FLmse,FLo'
om(object) <- value

## S4 replacement method for signature 'FLmse,FLQuants'
tracking(object) <- value

## S4 replacement method for signature 'FLmse,mpCtrl'
control(object) <- value

## S4 replacement method for signature 'FLmse,FLoem'
oem(object) <- value

Arguments

...	additional argument list that might never be used
object	object of relevant class (see signature of method)
value	Object to assign in slot

Slots

stock

The population and catch history, FLStock.

sr

The stock-recruitment relationship, FLSR.

refpts

The estimated reference points, FLPar.

fleetBehaviour

Dynamics of the fishing fleet to be used in projections, mseCtrl.

Validity

stock and sr dimensions

Dimensions 2:6 of the stock and sr slots must match.

rec age

Stock and stock recruitment residuals must use the recruitment age.

You can inspect the class validity function by using getValidity(getClassDef('FLom'))

Accessors

All slots in the class have accessor and replacement methods defined that allow retrieving and substituting individual slots.

The values passed for replacement need to be of the class of that slot. A numeric vector can also be used when replacing FLQuant slots, and the vector will be used to substitute the values in the slot, but not its other attributes.

Constructor

A construction method exists for this class that can take named arguments for any of its slots. All unspecified slots are then created to match the requirements of the class validity function.

Methods

Methods exist for various calculations based on values stored in the class:

METHOD

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Author(s)

The FLR Team

See Also

FLComp

Examples

data(sol274)
comb <- combine(iter(om, 1:50), iter(om, 51:100))
all.equal(om, comb)

flr/mse documentation built on Dec. 18, 2024, 10:38 p.m.