Man pages for fmichonneau/starbeastPPS
A posterior predictive check for the multispecies coalescent model implemented in *BEAST
| analyze.coalescent | analyzes the fit of coalescent genealogies to species trees |
| analyze.sequences | analyzes the fit of DNA sequences to gene trees estimated by... |
| mstree | simulate coalescent genealogies given a species tree using... |
| plot.coalescentteststats | plots output from analyze.coalescent |
| plot.sequenceteststats | plots output from analyze.sequences |
| read.gtree.samples | reads gene tree samples from the posterior generated by... |
| read.sptree.samples | reads in *BEAST species tree samples. |
| read.starbeast | this function reads in the results of a *BEAST phylogenetic... |
| starbeastPPS-package | A posterior predictive check for the multispecies coalescent... |
| summary.coalescentteststats | summarize multispecies coalescent PPS |
| summary.sequenceteststats | summarize sequence data PPS |
| tamias | Tamias phylogeny data |
