TabulaMurisSenisData-pkg: TabulaMurisSenisData

TabulaMurisSenisData-pkgR Documentation

TabulaMurisSenisData

Description

The TabulaMurisSenisData package provides access to the bulk RNA-seq data as well as the droplet and FACS single-cell RNA-seq data from the Tabula Muris Senis consortium. The data was downloaded from GEO (bulk) and figshare (single-cell) and is provided in the form of SingleCellExperiment objects.

References

Tabula Muris Consortium (2020): A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. Nature 583(7817): 590-595.

Schaum et al (2019): The murine transcriptome reveals global aging nodes withorgan-specific phase and amplitude. bioRxiv doi:10.1101/662254


fmicompbio/TabulaMurisSenisData documentation built on Nov. 5, 2024, 8:45 a.m.