extract.growthdata: Extract growth rates from plot databases and 2 censuses.

Description Usage Arguments Value

Description

Extract data for growth rates from plot databases and 2 censuses in CTFS R format.

Usage

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extract.growthdata(census1, census2, growcol = "incgr", mingrow = 0.1,
  logit = "x", growthfunc = growth.biomass.indiv, pomcut = 10000,
  rounddown = FALSE, mindbh = 10, dbhunit = "mm", err.limit = 4,
  maxgrow = 75, exclude.stem.change = TRUE, returnfull = FALSE)

Arguments

census1

The R Analytical Table for a single census, either tree or stem.

census2

The matching R Analytical Table for a later census.

logit

Defaults to return log-transformed growth, with negative and zero growth set to a mingrow, but with logit = TRUE, growth and dbh are not log-transformed.

rounddown

If TRUE, all dbh < 55 are rounded down to the nearest multiple of 5.

mindbh

The minimum diameter above which the counts are done. Trees smaller than mindbh are excluded. If NULL, all living trees are included.

dbhunit

'cm' or 'mm', only used for basal area

err.limit

A number. Numbers such as 10000 are high and will return all measures.

maxgrow

A number. Numbers such as 10000 are high and will return all measures.

Value

Returns a table with growth, size (ie dbh), and species name.


forestgeo/ctfs documentation built on May 3, 2019, 6:44 p.m.