gold_standard: Reference set of human protein complexes
In fosterlab/PrInCE: Predicting Interactomes from Co-Elution

A reference set of 467 experimentally confirmed human protein complexes, derived from the EBI Complex Portal database.

1	data(gold_standard)

a list containing 467 entries (character vectors)

467 protein complexes, ranging in size from 2 to 44 proteins and involving 877 proteins in total, to provide a reference set of true positive and true negative interactions (intra- and inter-complex interactions, respectively) for demonstration in PrInCE analysis of a co-elution dataset. Other "gold standards" are possible in practice, most notably the CORUM database; however, the Complex Portal reference set is included in this package due to its CC-BY license.

https://www.ebi.ac.uk/complexportal/complex/organisms

fosterlab/PrInCE documentation built on Dec. 13, 2020, 5:50 a.m.