scott: Cytoplasmic interactome of Jurkat T cells during apoptosis
In fosterlab/PrInCE: Predicting Interactomes from Co-Elution
Description
Usage
Format
Details
Source
Description
Co-elution profiles derived from size exclusion chromatography (SEC) of
cytoplasmic fractions from Jurkat T cells, 4 hours following Fas stimulation.
Usage
1
Format
a data frame with 1560 rows and 55 columns, with proteins in rows and
SEC fractions in columns
Details
Protein quantitation was accomplished by SILAC (stable isotopic labelling
by amino acids in cell culture), and is ratiometric, i.e., it reflects
the ratio between the intensity of the heavy isotope and the light isotope
("H/L"). The dataset was initially described in Scott et al.,
Mol. Syst. Biol. 2017. The heavy isotope channel from replicate
1 is included in the PrInCE package. The R script used to generate
this matrix from the supplementary materials of the paper is provided in the
data-raw directory of the package source code.
Source
http://msb.embopress.org/content/13/1/906
fosterlab/PrInCE documentation built on Dec. 13, 2020, 5:50 a.m.
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Description Usage Format Details Source
Description
Co-elution profiles derived from size exclusion chromatography (SEC) of cytoplasmic fractions from Jurkat T cells, 4 hours following Fas stimulation.
Usage
1 |
Format
a data frame with 1560 rows and 55 columns, with proteins in rows and SEC fractions in columns
Details
Protein quantitation was accomplished by SILAC (stable isotopic labelling
by amino acids in cell culture), and is ratiometric, i.e., it reflects
the ratio between the intensity of the heavy isotope and the light isotope
("H/L"). The dataset was initially described in Scott et al.,
Mol. Syst. Biol. 2017. The heavy isotope channel from replicate
1 is included in the PrInCE package. The R script used to generate
this matrix from the supplementary materials of the paper is provided in the
data-raw directory of the package source code.
Source
http://msb.embopress.org/content/13/1/906
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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