compute.frequency.evolution: Compute the evolution of the frequency of various genotype
In frederic-michaud/hapex: FRequency Evolution Simulator of Sex-linked Alleles

Description Usage Arguments Value Examples

Given a genome, this function simulate the evolution of the frequency of all the possible genotype that exist

1 2	compute.frequency.evolution(genome, initial.frequency = NULL, generations = 25)

`genome`	A S4 object of the type genome
`initial.frequency`	The initial frequency of the various genotype. If NULL is given the initial frequencies will all be set to the same value
`generations`	The number of generation that have to be computed (including the first one)

A matrix containing the frequencies of each genotype at each generation

locus1 = data.frame(allele1=c(1,1),allele2 = c(1,2),sd = c(0,1),fitness.male=c(1,1),fitness.female=c(1,1))
locus2 = data.frame(allele1=  c(1,1,2),allele2 = c(1,2,2),fitness.female = c(1,0.9,0.8),fitness.male = c(0.6,0.8,1))
genome = create.genome(locus1,locus2)
freqs <- compute.frequency.evolution(genome)