R/data.R

In frhl/our: genetic data analysis

#' @title gnomad 2.1.1 all lof variants
#' @description gnomAD LoF variants for gnomAD release 2.1.1.
#' @format data.table
#' @family datasets
#' @docType data
#' @source Downloaded from gnomAD website on 21-01-20
#' \url{https://storage.googleapis.com/gcp-public-data--gnomad/papers/2019-flagship-lof/v1.0/gnomad.v2.1.1.all_lofs.txt.bgz}

"gnomad2_lof_table"


#' @title hsapiens_gene_ensembl_grch38
#' @description Genes and gene positions from ensembl grch38
#' @format data.table
#' @family datasets
#' @docType data
#' @source Downloaded via biomart on 27-Jan-21

"hsapiens_gene_ensembl_grch38_chr1_24"

#' @title hsapiens_gene_ensembl_grch37
#' @description Genes and gene positions from ensembl grch37
#' @format data.table
#' @family datasets
#' @docType data
#' @source Downloaded via biomart on 27-Jan-21

"hsapiens_gene_ensembl_grch37_chr1_24"