predictions_comparison: Compare predictions
In gaelfortin/phosphogo: Analyze Your Phosphoproteomic Data

Description Usage Arguments

View source: R/predictions_comparison.R

Print NetworKIN and IV-KEA predictions on the same volcano plot to compare predictions.

predictions_comparison(
  ivkea_enrichment_file,
  networkin_enrichment_file,
  FDR_cutoff = 0.05,
  graph_title = "Kinases prediction enrichment Networkin vs IV-KEA",
  output_folder = "myexperiment/",
  file_name
)

`ivkea_enrichment_file`	`<character>` Location of the IV-KEA file with Fisher exact test results
`networkin_enrichment_file`	`<character>` Location of the IV-KEA file with Fisher exact test results
`FDR_cutoff`	`<numeric>` Cutoff to display.
`graph_title`	`<character>`
`output_folder`	`<character>` Where the output files should be stored
`file_name`	`<character>` File name including extension (.pdf recommended)