Files in gauravsk/ecoevoapps

Simulate Dynamics of Ecology/Evolution Models

LICENSE.md NEWS.md R/abiotic_resource_competition.R R/biotic_resource_competition.R R/ecoevoapps.R R/ibiogeo_functions.R R/infectious_disease_dynamics.R R/lotka_volterra_competition.R R/mutualism.R R/predator_prey_dynamics.R R/print_footer_apps.R R/run_shinyapp_files.R R/single_population_continuous.R R/single_population_discrete.R R/smith_fretwell_functions.R R/source_sink_dynamics.R R/structured_population_growth.R R/theme_apps.R README.md inst/abiotic_resource_competition/abiotic_resource_competition_ch.Rmd inst/abiotic_resource_competition/abiotic_resource_competition_en.Rmd inst/abiotic_resource_competition/abiotic_resource_competition_es.Rmd inst/abiotic_resource_competition/abiotic_resource_competition_pt.Rmd inst/abiotic_resource_competition/abiotic_resource_competition_tr.Rmd inst/biotic_resource_competition/biotic_resource_competition_ch.Rmd inst/biotic_resource_competition/biotic_resource_competition_en.Rmd inst/biotic_resource_competition/biotic_resource_competition_es.Rmd inst/biotic_resource_competition/biotic_resource_competition_pt.Rmd inst/biotic_resource_competition/biotic_resource_competition_tr.Rmd inst/infectious_diseases/infectious_disease_dynamics_ch.Rmd inst/infectious_diseases/infectious_disease_dynamics_en.Rmd inst/infectious_diseases/infectious_disease_dynamics_es.Rmd inst/infectious_diseases/infectious_disease_dynamics_pt.Rmd inst/infectious_diseases/infectious_disease_dynamics_tr.Rmd inst/island_biogeography/archive/Intro.Rmd inst/island_biogeography/archive/ProbModel.R inst/island_biogeography/archive/app.R inst/island_biogeography/archive/functions.R inst/island_biogeography/archive/ibiogeo_constants.R inst/island_biogeography/archive/test.R inst/island_biogeography/ibiogeo_ch.Rmd inst/island_biogeography/ibiogeo_en.Rmd inst/island_biogeography/ibiogeo_es.Rmd inst/island_biogeography/ibiogeo_pt.Rmd inst/island_biogeography/ibiogeo_tr.Rmd inst/lotka_volterra_competition/lotka_volterra_competition_ch.Rmd inst/lotka_volterra_competition/lotka_volterra_competition_en.Rmd inst/lotka_volterra_competition/lotka_volterra_competition_es.Rmd inst/lotka_volterra_competition/lotka_volterra_competition_pt.Rmd inst/lotka_volterra_competition/lotka_volterra_competition_tr.Rmd inst/mutualism/mutualism_ch.Rmd inst/mutualism/mutualism_en.Rmd inst/mutualism/mutualism_es.Rmd inst/mutualism/mutualism_pt.Rmd inst/mutualism/mutualism_tr.Rmd inst/population_growth_discrete/population_growth_discrete_ch.Rmd inst/population_growth_discrete/population_growth_discrete_en.Rmd inst/population_growth_discrete/population_growth_discrete_es.Rmd inst/population_growth_discrete/population_growth_discrete_pt.Rmd inst/population_growth_discrete/population_growth_discrete_tr.Rmd inst/predator_prey_dynamics/archive/Consumer_Resource_Type1.Rmd inst/predator_prey_dynamics/archive/Consumer_Resource_Type2.Rmd inst/predator_prey_dynamics/archive/Consumer_Resource_Variants.Rmd inst/predator_prey_dynamics/archive/phase_plane_attempt.R inst/predator_prey_dynamics/predator_prey_dynamics_ch.Rmd inst/predator_prey_dynamics/predator_prey_dynamics_en.Rmd inst/predator_prey_dynamics/predator_prey_dynamics_es.Rmd inst/predator_prey_dynamics/predator_prey_dynamics_pt.Rmd inst/predator_prey_dynamics/predator_prey_dynamics_tr.Rmd inst/single_population_continuous/archive/single_population_overview_chinese.Rmd inst/single_population_continuous/archive/single_population_overview_english.Rmd inst/single_population_continuous/archive/single_population_overview_turkish.Rmd inst/single_population_continuous/archive/single_populations_app.Rmd inst/single_population_continuous/single_population_app_ch.Rmd inst/single_population_continuous/single_population_app_en.Rmd inst/single_population_continuous/single_population_app_es.Rmd inst/single_population_continuous/single_population_app_pt.Rmd inst/single_population_continuous/single_population_app_tr.Rmd inst/single_population_continuous/single_populations_app_setup.R inst/single_population_continuous/single_populations_in_R.Rmd inst/smith_fretwell_model/smith_fretwell_app.Rmd inst/source_sink_dynamics/source_sink_dynamics.Rmd inst/structured_population/archive/app.R inst/structured_population/archive/struct_pop_app.Rmd inst/structured_population/archive/struct_pop_function.R inst/structured_population/archive/test.R inst/structured_population/archive/test2.R inst/structured_population/structured_population_ch.Rmd inst/structured_population/structured_population_en.Rmd inst/structured_population/structured_population_es.Rmd inst/structured_population/structured_population_pt.Rmd inst/structured_population/structured_population_tr.Rmd man/SEIR.Rd man/SEIR_ft.Rd man/SIR.Rd man/SIRD.Rd man/SIRD_ft.Rd man/SIR_ft.Rd man/SIR_no_vitals.Rd man/SIS.Rd man/SIS_ft.Rd man/assumption_check.Rd man/biotic_competition.Rd man/ecoevoapps-package.Rd man/exponential_growth.Rd man/ibiogeo_E.Rd man/ibiogeo_Ex.Rd man/ibiogeo_I.Rd man/ibiogeo_Ix.Rd man/ibiogeo_Sx.Rd man/lagged_logistic_growth.Rd man/logistic_growth.Rd man/lotka_volterra_competition.Rd man/lotka_volterra_competition_wo_K.Rd man/lv_predprey_logPrey.Rd man/lv_predprey_t1.Rd man/lv_predprey_t2.Rd man/make_equilibrium_plot.Rd man/make_islands_map.Rd man/mutualism.Rd man/mutualism_vector_field.Rd man/plot_abiotic_comp_portrait.Rd man/plot_abiotic_comp_time.Rd man/plot_biotic_comp_time.Rd man/plot_continuous_population_growth.Rd man/plot_discrete_population_cobweb.Rd man/plot_discrete_population_growth.Rd man/plot_functional_responses.Rd man/plot_infectiousdisease_portrait.Rd man/plot_infectiousdisease_time.Rd man/plot_leslie_diagram.Rd man/plot_lvcomp_portrait.Rd man/plot_lvcomp_time.Rd man/plot_mutualism_portrait.Rd man/plot_mutualism_time.Rd man/plot_predprey_portrait.Rd man/plot_predprey_time.Rd man/plot_source_sink.Rd man/plot_structured_population_agedist.Rd man/plot_structured_population_lambda.Rd man/plot_structured_population_size.Rd man/plot_vector_field.Rd man/popmat_to_df.Rd man/print_app_footer.Rd man/rm_predprey.Rd man/run_abiotic_comp_model.Rd man/run_abiotic_comp_rstar.Rd man/run_beverton_holt_model.Rd man/run_biotic_comp_model.Rd man/run_discrete_exponential_model.Rd man/run_discrete_logistic_model.Rd man/run_exponential_model.Rd man/run_ibiogeo_model.Rd man/run_infectiousdisease_model.Rd man/run_logistic_model.Rd man/run_lvcomp_model.Rd man/run_mutualism.Rd man/run_predprey_model.Rd man/run_ricker_model.Rd man/run_smith_fretwell_model.Rd man/run_smith_fretwell_model_sp2.Rd man/run_source_sink.Rd man/run_structured_population_simulation.Rd man/shiny_XXX.Rd man/theme_apps.Rd man/tilman_comp_essential.Rd man/vector_field_input.Rd tests/testthat.R tests/testthat/test-SIR-models.R tests/testthat/test-abiotic-resource-competition.R tests/testthat/test-biotic-resource-competition.R tests/testthat/test-ibiogeo.R tests/testthat/test-lvcomp.R tests/testthat/test-mutualism.R tests/testthat/test-popgrowth-continuous.R tests/testthat/test-predator-prey.R tests/testthat/test-single-population-discrete.R tests/testthat/test-smith-fretwell.R tests/testthat/test-source-sink.R tests/testthat/test-structured-popgrowth.R vignettes/contributing.Rmd vignettes/deploy-custom-apps.Rmd vignettes/diffeqs-in-R.Rmd vignettes/island-biogeo.Rmd vignettes/lotka-volterra-competition.Rmd vignettes/mechanistic-competition-models.Rmd vignettes/mutualisms.Rmd vignettes/population-growth.Rmd vignettes/predator-prey-interactions.Rmd vignettes/sir-dynamics.Rmd