plot_simulated_graph: Plot Graph from Continuous-Time Movement Descriptions

In gavincotterill/modulr: Simulate Individual Movement Behaviors Underlying Modular Fission-Fusion Networks

Plot Graph from Continuous-Time Movement Descriptions

Description

Plot a graph from modulr graphing functions. Optional seed can be set to facilitate side-by-side comparison with plot_sampled_graph.

Usage

plot_simulated_graph(
  g,
  vertex.size = 40,
  mark.expand = 25,
  vertex.label = NA,
  vertex.label.cex = 1.5,
  title = "",
  seed = NULL
)

Arguments

g	an igraph object output from simulate_graph() or graph_from_schedule()
vertex.size	node size in plot
mark.expand	padding of polygon denoting modules around nodes
vertex.label	label for graph vertices
vertex.label.cex	size for vertex labels
title	plot title
seed	optional integer value to set.seed() within function and preserve node layout when plotting sampled and simulated graphs

Value

a plot of the igraph object

Examples

g <- simulate_graph(n_animals = 25,
                    n_groups = 4,
                    time_to_leave = 5,
                    time_to_return = 2,
                    travel_time = c(0.01, 0.2),
                    samples_per_day = 1,
                    sampling_duration = 7)
plot_simulated_graph(g)

gavincotterill/modulr documentation built on Nov. 30, 2022, 11:15 p.m.