envMarker: Covariable matrices as environmental markers

In gcostaneto/envirotype: GIS platforms to support envirorytping in breeding programs

Description

Builds covariables matrices using different biological criteria

Usage

envMarker(.dfcov, .digits, .format = c("101", "rel-01", "PCA"), .ncp)

Arguments

.dfcov	Kernel of environmental covariates (see envK function)
.digits	output digits
.format	Criteria for elaboration of the environmental mark: 101 format (same as molecular marker); rel-01 (scaled to mean 0 and variance 1) and PCA (PCA strcuturec)
.ncp	defines the number of principal components to be used when .param = PCA

Author(s)

Germano Martins F Costa Neto <[e-mail]>

See Also

envK

envKernel df.cov : dataframe of environmental covariates digits: number of output digits format: environmental marker (012), centering and scaled to mean 0 and variance 1 (rel-01) principal component analysis (PCA) ncp : number of principal components used (valid only for format="PCA")

gcostaneto/envirotype documentation built on Feb. 19, 2020, 10:36 p.m.