update_dico_name: Update taxonomic data

In gdauby/bdd_plots_central_africa: Exploring and updating the Central Africa plot database

Update taxonomic data

Description

Update taxonomic data

Usage

update_dico_name(
  genus_searched = NULL,
  tax_esp_searched = NULL,
  tax_fam_searched = NULL,
  tax_order_searched = NULL,
  id_searched = NULL,
  new_tax_gen = NULL,
  new_tax_esp = NULL,
  new_tax_fam = NULL,
  new_tax_order = NULL,
  new_tax_rank1 = NULL,
  new_tax_rank = NULL,
  new_tax_name1 = NULL,
  new_tax_famclass = NULL,
  new_introduced_status = NULL,
  new_tax_rankesp = NULL,
  ask_before_update = TRUE,
  add_backup = TRUE,
  show_results = TRUE,
  cancel_synonymy = FALSE,
  synonym_of = NULL,
  exact_match = FALSE
)

Arguments

genus_searched	string genus name searched
tax_esp_searched	string species name searched
tax_fam_searched	string family name searched
new_tax_gen	string new genus name
new_tax_esp	string new species name
new_tax_fam	string new family name
new_tax_rank1	string new rank
new_tax_name1	string new name of rank1
ask_before_update	logical TRUE by default, ask for confirmation before updating
add_backup	logical TRUE by default, add backup of modified data
show_results	logical TRUE by default, show the data that has been modified
synonym_of	list if the selected taxa should be put in synonymy with an existing taxa, add in a list at least one values to identify to which taxa it will be put in synonymy: genus, species or id
new_full_name_auth	string new full name with authors
new_taxook	integer new tax code
new_morphocat	integer new morphocat code
new_detvalue	integer new detvalue code
new_full_name_no_auth	string new full name without authors - if not provided concatenate of new_esp and new_genus
new_full_name_used	string new full_name_used
new_full_name_used2	string new full_name_used2
new_id_diconame_good	integer if the selected name should be put in synonymy, id of the taxa
id_search	integer id of the taxa searched
no_synonym_modif	logical FALSE by default, if TRUE and if the selected taxa is considered as synonym, then this will be modified and the selected taxa will not longer be a synonym

Value

No return value individuals updated

Author(s)

Gilles Dauby, [e-mail]

gdauby/bdd_plots_central_africa documentation built on April 12, 2024, 1:15 a.m.