JASPAR2016-class: JASPAR2016 object

In ge11232002/JASPAR2016: Data package for JASPAR 2016

Description

The JASPAR2016 object class is a thin class for storing the path of JASPAR2016 style SQLite file.

Slots

db:

Object of class "character": a character string of the path of SQLite file.

Author(s)

Ge Tan

Examples

  ## Not run: 
    library(JASPAR2016)
    JASPAR2016

    library(TFBSTools)

    opts <- list()
    opts[["species"]] <- 9606
    opts[["type"]] <- "SELEX"
    opts[["all_versions"]] <- TRUE
    PFMatrixList <- getMatrixSet(JASPAR2016, opts)

    opts2 <- list()
    opts2[["type"]] <- "SELEX"
    PFMatrixList2 <- getMatrixSet(JASPAR2016, opts2)
  
## End(Not run)

ge11232002/JASPAR2016 documentation built on May 17, 2019, 12:13 a.m.