API for ge11232002/TKF
Pairwise Distance Estimation with TKF91 and TKF92 Model
| Global functions | |
|---|---|
| .validateBF | Source code |
| .validatePAMMatrix | Source code |
| AACharacterSet | Man page |
| AAGapCharacterSet | Man page |
| AAToInt | Man page Source code |
| AmbiguousAACharacterSet | Man page |
| AmbiguousAAGapCharacterSet | Man page |
| DNACharacterSet | Man page |
| DNAGapCharacterSet | Man page |
| Dayhoffn | Man page Source code |
| GONNET | Man page |
| GONNETBF | Man page |
| PAMn | Man page Source code |
| RNACharacterSet | Man page |
| RNAGapCharacterSet | Man page |
| TKF91 | Man page Source code |
| TKF912DLikelihoodFunctionWrapperR | Source code |
| TKF91LikelihoodFunctionWrapperR | Source code |
| TKF91Pair | Man page Source code |
| TKF92 | Man page Source code |
| TKF923DLikelihoodFunctionWrapperR | Source code |
| TKF925DHGLikelihoodFunctionWrapperR | Source code |
| TKF92HG | Man page Source code |
| TKF92HGLikelihoodFunctionWrapperR | Source code |
| TKF92HGPair | Man page Source code |
| TKF92LikelihoodFunctionWrapperR | Source code |
| TKF92Pair | Man page Source code |
| ls.tree | Source code |
| optim.phylo.wls | Man page Source code |
| smartOptimBrent | Source code |
| smartOptimBrentTKF92 | Source code |
| smartOptimBrentTKF92HG | Source code |
| validMatrix | Source code |
