fasta2struc: fasta2struc
In gehara/Junkyardtools: Toolbox for genetic junkyard survival
Description
Usage
Arguments
Value
Author(s)
Description
THIS SCRIPT PULLS OUT A RANDOM SNP FROM THE ALIGNMENTS TO MAKE A STRUCTURE FILE.
Usage
1
fasta2struc(path, samples2include, write.output = TRUE)
Arguments
path
path to the directory where all fasta alignments are.
samples2include
one column data frame with the name of the samples to include in the first column.
write.output
logical. If TRUE writes the structure file to working directory.
Value
Structure-like genotype matrix.
Author(s)
Gehara, M.
gehara/Junkyardtools documentation built on Nov. 4, 2019, 1:04 p.m.
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Description Usage Arguments Value Author(s)
Description
THIS SCRIPT PULLS OUT A RANDOM SNP FROM THE ALIGNMENTS TO MAKE A STRUCTURE FILE.
Usage
1 | fasta2struc(path, samples2include, write.output = TRUE)
|
Arguments
path |
path to the directory where all fasta alignments are. |
samples2include |
one column data frame with the name of the samples to include in the first column. |
write.output |
logical. If TRUE writes the structure file to working directory. |
Value
Structure-like genotype matrix.
Author(s)
Gehara, M.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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