plotPatternMarkers: plotPatternMarkers
In genesofeve/GWCoGAPS:

Description Usage Arguments Value See Also Examples

View source: R/plotPatternMarkers.R

plotPatternMarkers

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plotPatternMarkers(data = NA, patternMarkers = PatternMarkers,
  patternPalette = NA, sampleNames = NA, samplePalette = NA,
  colDenogram = TRUE, heatmapCol = "bluered", scale = "row", ...)

`data`	<the dataset from which the patterns where generated>
`patternMarkers`	<the list of genes generated from the patternMarkers function>
`patternPalette`	<a vector indicating what color should be used for each pattern>
`sampleNames`	<names of the samples to use for labeling >
`samplePalette`	< a vector indicating what color should be used for each sample>

heatmap of the data values for the patternMarkers

gplot and heatmap.2

## Not run: 
plotPatternMarkers(data=p,patternMarkers=PatternMarkers,patternPalette=NA,sampleNames=pd$sample,
samplePalette=pd$color,colDenogram=TRUE,heatmapCol="bluered", scale='row')

## End(Not run)