plotCuminc: Cumulative incidences curves

In geneticsMiNIng/cr17: Testing Differences Between Competing Risks Models and Its Visualisations

Description

Plots cumulative incidences curves for each risk and group.

Usage

plotCuminc(ci, cens = NULL, target = NULL, ggtheme = theme_minimal(),
  titleCuminc = "Cumulative incidence functions", xtitle = "Time",
  ytitleCuminc = "Cumulative incidences", legendtitle = "Group")

Arguments

ci	a result of function fitCuminc.
cens	value of 'risk' indicating censored observation (default 0).
target	point in time, in which the confidence bounds should be plotted (default NULL, no confidence bounds plotted).
ggtheme	ggtheme to be used (default: theme_minimal()).
titleCuminc	a title of a plot (default: "Cumulative incidence functions").
xtitle	a title of x axis (default: "Time").
ytitleCuminc	a title of y axis (default: "Cumulative incidences")
legendtitle	a title of a legend (default: "Group").

Value

a ggplot containing n graphs, where n is number of risks. Each graph represents cumulative incidence curves for given risk. One curve corresponds to one group.

See Also

ggplot ggtheme

Examples

fitC <- fitCuminc(time = LUAD$time, risk = LUAD$event, group = LUAD$gender, cens = "alive")
plotCuminc(ci = fitC, cens = "alive", target = 1200)

geneticsMiNIng/cr17 documentation built on Sept. 16, 2019, 7:23 a.m.