# this chunk is just to keep the _files directory even when we turn off cacheing
# save start time for script
start_tm <- Sys.time()
start_tm
outdir <- "./script_name_out_files/"

dir.create(outdir, recursive=TRUE)
knitr::opts_chunk$set(echo=TRUE, warning=TRUE, message=TRUE, cache=FALSE, cache.lazy = FALSE, dev=c('png','pdf'), fig.width=8, fig.height=8, fig.path=paste0(outdir, "individual_figures/"))

Packages loaded

library(dplyr)
library(stringr)
library(readr)

SessionInfo

sessionInfo()

Time

# output time taken to run script
end_tm <- Sys.time()
end_tm
end_tm - start_tm


genomics-kl/KLmisc documentation built on Nov. 25, 2022, 6:39 p.m.