Man pages for gerstung-lab/MutationTimeR
Timing somatic point mutations and copy number gains

bbToTimeConvert timing parameters into timing estimates
classifyMutationsClassify Mutations
computeMutCnCompute timing parameters
defineMcnStatesCompute possible Mutation copy number states
getAltCountGet alt alleles counts
getTumorDepthExtract tumour depth
mtHeaderReturn header elements
mutationTimeCompute mutation time from copy number gains and point...
MutationTimeRTiming of point mutations and copy number gains from deep...
plotSamplePlot timing
refLengthsReference lengths for hg37d5
gerstung-lab/MutationTimeR documentation built on July 26, 2018, 12:31 a.m.