Man pages for gevaertlab/EpiMix.data
Data for the EpiMix package
| EPIC_lncRNA_probes | A character vector that maps CpG probes to lncRNA genes. The... |
| EPIC_miRNA_probes | A dataframe that maps CpG probes genes to microRNA genes. The... |
| EpigenomeMap | A list that map epigenome groups to epigenome IDs |
| HM450_lncRNA_probes | A character vector that maps CpG probes to lncRNA genes. The... |
| HM450_miRNA_probes | A dataframe that maps CpG probes genes to microRNA genes. |
| lncRNA.data | Toy lncRNA expression dataset for demonstration purpose. |
| LUAD.sample.annotation | toy dataset for sample annotation |
| MET.data | Toy DNA methylation dataset for demonstration purpose. |
| microRNA.data | Toy microRNA expression dataset for demonstration purpose. |
| mRNA.data | Toy gene expression dataset for demonstration purpose. |
| Sample_EpiMixResults_Enhancer | toy dataset for EpiMix output with Enhancer mode |
| Sample_EpiMixResults_lncRNA | toy dataset for EpiMix output with lncRNA mode |
| Sample_EpiMixResults_miRNA | toy dataset for EpiMix output with miRNA mode |
| Sample_EpiMixResults_Regular | toy dataset for EpiMix output with Regular mode |
| TCGA_BatchData | A dataframe with the batch information of TCGA patient. |
