getGeneOrthos: get Gene Orthologs

In ggedman/orthofindR: Tool for defining gene orthology across species

Description

Get the one-to-one ortholog for a specific gene between a given species and a desired species

Usage

getGeneOrthos(input_org, output_org, gene)

Arguments

input_org	Species you are starting from. This should be in the latin name format. i.e. Human, Homo Sapien should be "hsapiens"
output_org	Species you want to know the orthologs in. Same format as input_org.
gene	Ensembl ID of gene in the starting species.

Value

data frame with all one-to-one orthologs between specified species

ggedman/orthofindR documentation built on Nov. 20, 2019, 9:02 p.m.