el2adj: Maps edgelist to adjacency matrix

In gi0na/adjConvertR: Handle and Manipulate Adjacency Matrices

Description

Maps edgelist to adjacency matrix

Usage

el2adj(
  edge.list,
  select_cols = NULL,
  multiedge = FALSE,
  aggr_expression = NULL,
  nodes = NULL,
  sparse = TRUE,
  drop_names = FALSE,
  directed = NULL,
  selfloops = NULL
)

Arguments

edge.list	dataframe containing a (weighted) edgelist.
select_cols	optional vector of 3 (2 for multi-graphs) elements specifying which columns are the source,target, and attributes from which building the graph. Otherwise Column 1 is assumed to be the source, column 2 the target, column 3 the attribute. In the case of multi-graphs, the third element is not needed and the number of edges between each pair of vertices is computed according to 'aggr_expression'.
multiedge	boolean, are there multiple edges? defaults to FALSE.
aggr_expression	string, the expression used to compute the aggregated value in the adjacency matrix in the presence of multiedges. It defaults to 'dplyr::n()'. If 'edge.list' contains other columns such as 'weight', examples of 'aggr_expression' could be '"mean(weight)"' to report the average of the 'weight' column of the multiedges, '"min(weight)"' to report the minimum of the 'weight' column of the multiedges.
nodes	optional vector containing all node names in case disconnected nodes should be included.
sparse	boolean, return sparse matrix? default to TRUE
drop_names	boolean, drop names from matrix and return a vector of names together with the matrix. This option saves considerable memory when dealing with graphs with long node names.
directed	boolean, optional parameter, if FALSE, forces to undirected upper triangular adjacency matrix
selfloops	boolean, optional parameter, if ignores selfloops.

Value

the (weighted) adjacency matrix corresponding the edgelist passed. If 'drop_names' is TRUE, returns a list with the adjacency matrix and a vector with node names.

Examples

el <- data.frame(from= c('a','b','b','c','d','d'),
                to  = c('b','c','d','a','b','a'),
                attr= c( 12, 6, 12 , 6 , 6 , 6 ))
adj <- el2adj(el)

gi0na/adjConvertR documentation built on Jan. 7, 2022, 4:48 a.m.