BuildDesign: BuildDesign
In gimelbrantlab/QCumber: Detects differential allelic imbalance from RNA-seq data
Description
Usage
Arguments
Value
Examples
Description
Creates a design matrix for the experiment
Usage
1
BuildDesign(experimentNames, techReps, corrConst = NA)
Arguments
experimentNames
Vector with names of the experiments
techReps
Vector with number of technical replicates in each experiment
corrConst
Optional, a vector with correction constants for each experiment
Value
Dataframe with experiments numbered and numbers of columns
Examples
1
BuildDesign(c("clone1", "clone2", "clone3"), c(2, 2, 3), c(1.7, 1.8, mean(1.55, 1.6, 1.57)))
gimelbrantlab/QCumber documentation built on Feb. 26, 2020, 6:17 p.m.
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Description Usage Arguments Value Examples
Description
Creates a design matrix for the experiment
Usage
1 | BuildDesign(experimentNames, techReps, corrConst = NA)
|
Arguments
experimentNames |
Vector with names of the experiments |
techReps |
Vector with number of technical replicates in each experiment |
corrConst |
Optional, a vector with correction constants for each experiment |
Value
Dataframe with experiments numbered and numbers of columns
Examples
1 | BuildDesign(c("clone1", "clone2", "clone3"), c(2, 2, 3), c(1.7, 1.8, mean(1.55, 1.6, 1.57)))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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