browseJob: Open ChemMine Tools Job in Web Browser

In girke-lab/ChemmineR: Cheminformatics Toolkit for R

Open ChemMine Tools Job in Web Browser

Description

Launches a web browser to view the results of a ChemMine Tools web job with an interactive online viewer. Note that this reassigns the job to the current logged in user within the browser, so it becomes no longer accessible by the result and status functions. Any results should be saved within R before launching a browser.

Usage

browseJob(object)

Arguments

object

A jobToken job as returned by the function launchCMTool

Value

Returns an URL string which can be used to access the job results. The function also attempts to open the url with the browseURL function. As this URL can only be used once, the returned string is only useful if the browseURL function fails to open a browser.

Author(s)

Tyler William H Backman

References

See ChemMine Tools at http://chemmine.ucr.edu.

See Also

Functions: toolDetails, listCMTools, launchCMTool, result, status

Examples

## Not run: 
## list available tools
listCMTools()

## get detailed instructions on using a tool
toolDetails("Fingerprint Search")

## download compound 2244 from PubChem
job1 <- launchCMTool("pubchemID2SDF", 2244)

## check job status and download result
status(job1)
result1 <- result(job1)

## open job in web browser
browseJob(job1)

## End(Not run)

girke-lab/ChemmineR documentation built on July 28, 2023, 10:36 a.m.