data_modify_pops: Modify Populations within IFC_data Object

In gitdemont/IFC: Tools for Imaging Flow Cytometry

Modify Populations within IFC_data Object

Description

Modify populations in an already existing 'IFC_data' object.

Usage

data_modify_pops(obj, pops, display_progress = TRUE, ...)

Arguments

obj	an 'IFC_data' object extracted by ExtractFromDAF(extract_features = TRUE) or ExtractFromXIF(extract_features = TRUE).
pops	a list of population(s) to modify in 'obj'. Each element of this list will be coerced by buildPopulation.
display_progress	whether to display a progress bar. Default is TRUE.
...	Other arguments to be passed.

Details

pops names should be present in names(obj$pops), otherwise an error will be raised.
Note that If you want to rename pops, you should do it by changing 'name' member, e.g. pops[[1]]$name <- "bar" while names(pops[[1]]) is "foo" and "foo" is part of names(obj$pops). However, new names should not be present in 'obj'.

Value

an IFC_data object with pops modified.

gitdemont/IFC documentation built on Feb. 20, 2025, 12:55 a.m.