Quantitative-Pathway-Analysis-pkg: Quantitative Pathway Analysis
In github-gs/QPA: Quantitative Pathway Analysis

This package provides tools for analysis KEGG pathways quantitatively. A new quantitative way to analysis biological pathways which contains functions for vectorizing and comparing pathways.

Main functions are as follows; additional help is available for each function, e.g., '?QPA::pathway_vectorization'.

'QPA::merge_pathway()': Return a list containing three elements KEGG IDs,ENTREZ ID of genes which are pathway members,pathway and gene interaction.
'QPA::pathway_vectorization()': Return a list which contains two pathway-gene profiles that are vectorization result of pathways. Colnames are pathways' names, rownames are genes' names.
'QPA::pathway_comparison()': Return a dataframe containing pathway ID and p-value.