API for gkeele/sparcc
Simulated Power Analysis in the Realized Collaborative Cross
| Global functions | |
|---|---|
| ENV | Source code |
| add.curve.to.fpr.plot | Source code |
| add.curve.to.power.plot | Source code |
| assert.happy | Source code |
| binomial.prop.ci | Source code |
| build.position.scaffold | Source code |
| calc.manual.mark.locus | Source code |
| calc.qtl.effect | Source code |
| calc.scaled.residual | Source code |
| caught.error | Source code |
| convert.qtl.effect.to.means | Man page Source code |
| dfapply | Source code |
| elem | Source code |
| expand.for.polygon | Source code |
| extract.compact.qr | Source code |
| extract.qr | Source code |
| force.logical | Source code |
| formula.as.string | Source code |
| fpr.plot | Source code |
| generate.perm.matrix | Man page Source code |
| genome.plotter.sparcc | Source code |
| genotype.to.count | Source code |
| genotype.to.factor | Source code |
| genotype.to.hier | Source code |
| get.f.stat.p.val | Source code |
| get.thresholds | Man page Source code |
| happy.check.bp | Source code |
| happy.clear.reserve | Source code |
| happy.get.allele.freq | Source code |
| happy.get.allowed.models | Source code |
| happy.get.bp | Source code |
| happy.get.chromosome | Source code |
| happy.get.chromosome.length | Source code |
| happy.get.design | Source code |
| happy.get.design.old | Source code |
| happy.get.diplotype.tensor | Source code |
| happy.get.first.marker | Source code |
| happy.get.genotype | Source code |
| happy.get.interval.length | Source code |
| happy.get.interval.midpoint | Source code |
| happy.get.interval.over | Source code |
| happy.get.interval.range | Source code |
| happy.get.intervals | Source code |
| happy.get.intervals.in.range | Source code |
| happy.get.last.marker | Source code |
| happy.get.location | Source code |
| happy.get.markers | Source code |
| happy.get.markers.between | Source code |
| happy.get.models | Source code |
| happy.get.next.marker | Source code |
| happy.get.position | Source code |
| happy.get.previous.marker | Source code |
| happy.get.reserve.limit | Source code |
| happy.get.reserved.marker | Source code |
| happy.get.strains | Source code |
| happy.get.subjects | Source code |
| happy.has.chromosomes | Source code |
| happy.has.markers | Source code |
| happy.has.model | Source code |
| happy.has.reserved.marker | Source code |
| happy.has.subjects | Source code |
| happy.init.reserve | Source code |
| happy.is.auto.reserve | Source code |
| happy.list.chromosomes | Source code |
| happy.load.marker | Source code |
| happy.make.colnames | Source code |
| happy.matrixop.diplotypes.to.full | Source code |
| happy.matrixop.full.asymmetric.to.diplotypes | Source code |
| happy.matrixop.full.to.diplotypes | Source code |
| happy.num.strains | Source code |
| happy.reserve.exists | Source code |
| happy.reserve.get | Source code |
| happy.reserve.has | Source code |
| happy.reserve.has.scratch | Source code |
| happy.reserve.marker | Source code |
| happy.reserve.markers | Source code |
| happy.reserve.memory.usage | Source code |
| happy.reserve.put | Source code |
| happy.set.auto.reserve | Source code |
| ifow | Source code |
| igrep | Source code |
| incidence.matrix | Source code Source code |
| interpolate | Source code |
| interpolate.Sys.env | Source code |
| interpolate.qtl.distance | Man page Source code |
| interpolate.qtl.power | Man page Source code |
| interpolate.table | Man page Source code |
| invlogit | Source code |
| is.formula | Source code |
| is.wholenumber | Source code |
| list.subdirs | Source code |
| logit | Source code |
| map.eq | Source code |
| model.matrix.from.ID | Source code |
| non.sample.var | Source code |
| object.sizes | Source code |
| power.plot | Source code |
| pull.dist.from.locus | Man page Source code |
| pull.false.positive.prob | Man page Source code |
| pull.power | Man page Source code |
| pull.qr.from.compact | Source code |
| run.perm.scans | Man page Source code |
| run.sim.scans | Man page Source code |
| scan.qr | Source code |
| se.mean | Source code |
| sim.CC.data | Man page Source code |
| sim.CC.data.K | Man page Source code |
| sim.data.all.effect.plot | Source code |
| sim.data.all.ve.plot | Source code |
| sim.data.effect.plot | Source code |
| sim.data.ve.plot | Source code |
| simulate.CC.qtl | Source code |
| simulate.QTL.model.and.effects | Source code |
| single.sim.plot | Man page Source code |
| split.formula | Source code |
| split.pathname | Source code |
| straineff.mapping.matrix | Source code |
| strcat | Source code |
| string.trim | Source code |
| take.fixef.residuals | Source code |
| take.ranef.residuals | Source code |
| tr | Source code |
| write.delim | Source code |
