R/doClpConstr.R

In glotaran/TIMP: Fitting Separable Nonlinear Models in Spectroscopy and Microscopy

"doClpConstr" <-
  function(X, clp_ind, clpCon, clpequ, num_clpequ, usecompnames0,
           usecompnamesequ) {
    # add equality constraints
    if (num_clpequ > 0) {
      for (i in 1:num_clpequ) {
        X[, clpCon$clpMod[clp_ind, i]] <-
          X[, clpCon$clpMod[clp_ind, i]] +
          X[, clpCon$clpRem[clp_ind, i]] * clpequ[i]
      }
    }
    ## column indices that are removed because of 0 constraints
    if (usecompnames0) {
      rem0 <- colnames(X)[which(clpCon$clp0mat[clp_ind, ] > 0)]
    } else {
      rem0 <- which(clpCon$clp0mat[clp_ind, ] > 0)
    }
    ## column indices that are removed because of equ constraints
    if (usecompnamesequ) {
      remE <- colnames(X)[clpCon$clpRem[clp_ind, ]]
    } else {
      remE <- clpCon$clpRem[clp_ind, ]
    }
    rem <- append(rem0, remE)

    if (sum(rem) > 0) {
      X <- as.matrix(X[, -rem])
    }


    X
  }