cal_cor: Calculate Correlation
In gpli/DNB: Dynamical Network Biomarkers
cal_cor R Documentation
Calculate Correlation
Description
Calculate correlation among genes by sample groups
Usage
cal_cor(dnb, adjust_size = T, use_bigcor = F, data_dir = NULL, ...)
Arguments
dnb
a DNB object
adjust_size
adjust sample size
use_bigcor
a logical value, use propagate::bigcor to calculate
correlation which will save some memory, and is sometimes fast
data_dir
a charactor value, set path to store correlation results
to local RDS files in order to reduce memory pressure
...
additional arguments to parpagate::bigcor or cor
Value
a DNB object
gpli/DNB documentation built on Sept. 21, 2022, 10:57 p.m.
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| cal_cor | R Documentation |
Calculate Correlation
Description
Calculate correlation among genes by sample groups
Usage
cal_cor(dnb, adjust_size = T, use_bigcor = F, data_dir = NULL, ...)
Arguments
dnb |
a DNB object |
adjust_size |
adjust sample size |
use_bigcor |
a logical value, use propagate::bigcor to calculate correlation which will save some memory, and is sometimes fast |
data_dir |
a charactor value, set path to store correlation results to local RDS files in order to reduce memory pressure |
... |
additional arguments to |
Value
a DNB object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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