costdistances: Calculates cost distances for a given landscape (resistance...
In green-striped-gecko/PopGenReport: A Simple Framework to Analyse Population and Landscape Genetic Data
View source: R/costdistances.r
costdistances R Documentation
Calculates cost distances for a given landscape (resistance matrix)
Description
calculates a cost distance matrix, to be used with run.popgensim
Usage
costdistances(landscape, locs, method, NN)
Arguments
landscape
a raster object coding the resistance of the landscape
locs
coordinates of the subpopulations
method
defines the type of cost distance, types are "least-cost", "rSPDistance" or "commute (Circuitscape type)"
NN
number of next neighbours recommendation is 8
Value
a costdistance matrix between all pairs of locs
green-striped-gecko/PopGenReport documentation built on Oct. 15, 2023, 6:22 a.m.
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View source: R/costdistances.r
| costdistances | R Documentation |
Calculates cost distances for a given landscape (resistance matrix)
Description
calculates a cost distance matrix, to be used with run.popgensim
Usage
costdistances(landscape, locs, method, NN)
Arguments
landscape |
a raster object coding the resistance of the landscape |
locs |
coordinates of the subpopulations |
method |
defines the type of cost distance, types are "least-cost", "rSPDistance" or "commute (Circuitscape type)" |
NN |
number of next neighbours recommendation is 8 |
Value
a costdistance matrix between all pairs of locs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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