API for grimbough/METAcrispR
Mixed Effects Model for the analysis of CRISPR screens
| Global functions | |
|---|---|
| .createReferenceFasta | Source code |
| .extractGeneSymbol | Source code |
| .fitLibGuide.sampleSpecific | Source code |
| .fitSampleLibGuide | Source code |
| .fixGuideNames | Source code |
| .identifyLibFromSample | Source code |
| .libFromGuideName | Source code |
| .pcaInternal | Source code |
| .readSampleSheet | Source code |
| .scatterMatrix | Source code |
| .selectReference | Source code |
| .writeCounts | Source code |
| MEMcrispR | Man page |
| PanCell.fitModel | Man page |
| fitPanCellLibGuide | Source code |
| gm_mean | Source code |
| memcrispr.align | Man page Source code |
| memcrispr.compareControlGuides | Man page Source code |
| memcrispr.count | Man page Source code |
| memcrispr.fitModel | Man page |
| memcrispr.fitModel.mc | Man page |
| memcrispr.fitModel.sampleSpecific | Man page |
| memcrispr.guideDistribution | Man page Source code |
| memcrispr.libraryCounts | Source code |
| memcrispr.normalizeBetweenSamples | Man page Source code |
| memcrispr.readCounts | Man page Source code |
| memcrispr.volcanoPlot | Man page Source code |
| normalizeBetweenSamples.old | Man page Source code |
| normalizeBetweenSamples.readdepth | Man page Source code |
| normalizeWithinSamples | Man page Source code |
| print_and_capture | Source code |
| readCounts | Source code |
| readGuideSequences | Source code |
| readGuideSequences2 | Source code |
| readGuideSequencesSimple | Source code |
