API for grimbough/METAcrispR
Mixed Effects Tool for Analysis of CRISPR screens

Global functions
PanCell.fitModel Man page Source code
createReferenceFasta Source code
dentifyLibFromSample Source code
extractGeneSymbol Source code
filterGenesByCellLines Source code
fitGuide Source code
fitGuide.sampleSpecific Source code
fitLibGuide Source code
fitLibGuide.sampleSpecific Source code
fitPanCellGuide Source code
fitPanCellLibGuide Source code
fitSampleLibGuide Source code
fixGuideNames Source code
gm_mean Source code
libFromGuideName Source code
metacrispR Man page
metacrispR-package Man page
metacrispr.align Man page Source code
metacrispr.compareControlGuides Man page Source code
metacrispr.controlGuideCorrelation Source code
metacrispr.count Man page Source code
metacrispr.fitModel Man page Source code
metacrispr.fitModel.mc Man page Source code
metacrispr.fitModel.sampleSpecific Man page Source code
metacrispr.guideDistribution Man page Source code
metacrispr.libraryCounts Source code
metacrispr.normalizeBetweenSamples Man page Source code
metacrispr.pcaPlot Source code
metacrispr.readCounts Man page Source code
metacrispr.volcanoPlot Man page Source code
normalizeBetweenSamples.old Man page Source code
normalizeBetweenSamples.readdepth Man page Source code
normalizeWithinSamples Man page Source code
pcaInternal Source code
print_and_capture Source code
readCounts Source code
readGuideSequences Source code
readGuideSequences2 Source code
readGuideSequencesSimple Source code
readSampleSheet Source code
reorder_cormat Source code
scatterMatrix Source code
selectReference Source code
writeCounts Source code
grimbough/METAcrispR documentation built on Feb. 6, 2018, 6:52 a.m.