memcrispr.readCounts: Read text files of counts
In grimbough/METAcrispR: Mixed Effects Model for the analysis of CRISPR screens
Description
Usage
Arguments
Value
View source: R/file_processing.R
Description
This is the main data import function for the MEMcrispR package. It
expects to be provided with a directory location containing a sample sheet
and text files holding the observed counts for each guide, with one file per
sequencing library.
Usage
1
memcrispr.readCounts(path, sampleSheet = NULL, guideLibraries = NULL)
Arguments
path
File path to the folder containing the data.
sampleSheet
Name of the sample sheet file. If left as NULL
this will default to 'SampleSheet.txt'.
Value
A tibble containing counts for all guides across all samples.
grimbough/METAcrispR documentation built on Feb. 3, 2021, 4:14 a.m.
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Description Usage Arguments Value
View source: R/file_processing.R
Description
This is the main data import function for the MEMcrispR package. It
expects to be provided with a directory location containing a sample sheet
and text files holding the observed counts for each guide, with one file per
sequencing library.
Usage
1 | memcrispr.readCounts(path, sampleSheet = NULL, guideLibraries = NULL)
|
Arguments
path |
File path to the folder containing the data. |
sampleSheet |
Name of the sample sheet file. If left as |
Value
A tibble containing counts for all guides across all samples.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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