snpclone-method: Methods used for the snpclone object

In grunwaldlab/poppr: Genetic Analysis of Populations with Mixed Reproduction

Methods used for the snpclone object

Description

Default methods for subsetting snpclone objects.

Usage

## S4 method for signature 'snpclone,ANY,ANY,ANY'
x[i, j, ..., mlg.reset = FALSE, drop = FALSE]

## S4 method for signature 'snpclone'
initialize(.Object, ..., mlg, mlgclass = TRUE)

## S4 method for signature 'snpclone'
show(object)

Arguments

x	a snpclone object
i	vector of numerics indicating number of individuals desired
j	a vector of numerics corresponding to the loci desired.
...	passed on to the genlight object.
mlg.reset	logical. Defaults to FALSE. If TRUE, the mlg vector will be reset
drop	set to FALSE
.Object	a character, "snpclone"
mlg	a vector where each element assigns the multilocus genotype of that individual in the data set.
mlgclass	a logical value specifying whether or not to translate the mlg object into an MLG class object.
object	a snpclone object

Author(s)

Zhian N. Kamvar

grunwaldlab/poppr documentation built on March 18, 2024, 11:24 p.m.