hiv: Gene expression data HIV

In gschofl/coursedata: Data supporting Introductory and Statistical Data Analysis with R.

Description

A random sample of 6000 genes from gene expression data set GDS4358. Contains expression data from basal ganglia, frontal cortex, and white matter tissue from HIV patients and controls.

Usage

hiv

Format

A data frame with 216000 rows and 5 columns:

sample

Sample code (6 samples per tissue per state)

state

control or HIV

tissue

One of Basal ganglia, Frontal cortex, or White matter

gene

One of 6000 gene objects

expr

log-transformed expression values

Source

Gelman BB, Chen T, Lisinicchia JG, Soukup VM et al. The National NeuroAIDS Tissue Consortium brain gene array: two types of HIV-associated neurocognitive impairment. PLoS One 2012;7(9):e46178. PMID: 23049970

Examples

summary(hiv)

gschofl/coursedata documentation built on May 17, 2019, 8:52 a.m.