read.vcf: read vcf files
In guokai8/CandiHap: Build Haplotye and Generate Figures
Description
Usage
Arguments
Value
Author(s)
Description
read vcf files
Usage
1
Arguments
file
A ‘VcfFile’ (synonymous with ‘TabixFile’) instance or
character() name of the VCF file to be processed. When ranges
are specified in ‘param’, ‘file’ must be a ‘VcfFile’.
genome
A ‘character’ or ‘Seqinfo’ object.
param
param: An instance of ‘ScanVcfParam’, ‘GRanges’, ‘GRangesList’ or
‘IntegerRangesList’
Value
GRanges object
Author(s)
Kai Guo
guokai8/CandiHap documentation built on Nov. 26, 2021, 9:08 a.m.
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Description Usage Arguments Value Author(s)
Description
read vcf files
Usage
1 |
Arguments
file |
A ‘VcfFile’ (synonymous with ‘TabixFile’) instance or character() name of the VCF file to be processed. When ranges are specified in ‘param’, ‘file’ must be a ‘VcfFile’. |
genome |
A ‘character’ or ‘Seqinfo’ object. |
param |
param: An instance of ‘ScanVcfParam’, ‘GRanges’, ‘GRangesList’ or ‘IntegerRangesList’ |
Value
GRanges object
Author(s)
Kai Guo
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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