getEffCons: This function runs through a list of snpEFF annotations and...
In gustavahlberg/Glib:
Description
Usage
Arguments
Examples
Description
This function runs through a list of snpEFF annotations and returns a index vector
of variants with the searched impact (LOW/HIGH/MODERATE/MODERATE)
if LOW is set to TRUE and a indexlist if LOW is FALSE
Usage
1
getEffCons(Y, con)
Arguments
Y
a list of snpEFF annotations, con a string vector
Examples
1
2
getEffCons(info(vcf)$EFF, cons)
getEffCons()
gustavahlberg/Glib documentation built on May 17, 2019, 9:28 a.m.
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Description Usage Arguments Examples
Description
This function runs through a list of snpEFF annotations and returns a index vector of variants with the searched impact (LOW/HIGH/MODERATE/MODERATE) if LOW is set to TRUE and a indexlist if LOW is FALSE
Usage
1 | getEffCons(Y, con)
|
Arguments
Y |
a list of snpEFF annotations, con a string vector |
Examples
1 2 | getEffCons(info(vcf)$EFF, cons)
getEffCons()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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