summary.outce: summary.outce S3 function to summarize standardization...

In haddonm/rforcpue: Functions to Assist With The Analysis of CPUE Data

summary.outce S3 function to summarize standardization results

Description

summary.outce an S3 function to summarize out the primary results from a standardization. It includes the structure of the output so other things can be obtained if wished.

Usage

## S3 method for class 'outce'
summary(x)

Arguments

x	is the output from a standardization perhaps using standLM. It must be of class outce an S3 class

Value

Summarizes the contents of the output from standardization, this includes

Structure

this lists the top-level structure of the object output from the standardizations from standLM

Parameters by Model

This tabulates the yearly parameters for each of the models tested, the 'mods' input to standLM

Std Errors by Model

The matching standard errors for each of the models, one column for each column of paramters; large sample sizes mean these are usually an significant under-estimate of the true variaiton

Model Diagnostic Properties

A table of the statistical performance of each model, allowing the identification of the optimum model

Optimum model

identifies which column relates to the optimum statistical model

All parameters

The un-back-transformed parameters for the complete optimum model

Examples

## Not run: 
 data(sps)
 splabel = "Blue-Eye"
 labelM <- c("Year","Vessel","Month")
 sps1 <- makecategorical(labelM,sps)
 mods <- makemodels(labelM)
 out <- standLM(mods,sps1,splabel)
 summary(out)

## End(Not run)

haddonm/rforcpue documentation built on Oct. 12, 2024, 11:55 p.m.