check_data: Check a dataset to ensure it will be compatible with hbgd...

In hafen/hbgd: Healthy birth, growth & development

Description

Check a dataset to ensure it will be compatible with hbgd methods

Usage

check_data(dat, has_height = TRUE, has_weight = TRUE, has_hcir = TRUE)

Arguments

dat	a data frame
has_height	does this dataset contain anthropometric height data?
has_weight	does this dataset contain anthropometric weight data?
has_hcir	does this dataset contain anthropometric head circumference data?

Examples

library(growthstandards)
check_data(cpp, has_hcir = FALSE)

smc <- brokenstick::smocc.hgtwgt
check_data(smc, has_hcir = FALSE)

names(smc)[2] <- "subjid"
names(smc)[5] <- "agedays"
smc$sex <- as.character(smc$sex)
smc$sex[smc$sex == "male"] <- "Male"
smc$sex[smc$sex == "female"] <- "Female"
names(smc)[10] <- "htcm"
names(smc)[11] <- "wtkg"

check_data(smc, has_hcir = FALSE)

names(smc)[12] <- "haz"
smc$waz <- who_wtkg2zscore(smc$agedays, smc$wtkg, smc$sex)
smc$agedays <- smc$agedays * 365.25

check_data(smc, has_hcir = FALSE)

hafen/hbgd documentation built on March 1, 2020, 5:31 p.m.