getGroupSummary: Get summary for Groups in ArchRProject
In haibol2016/ArchR_debug: Analyzing single-cell regulatory chromatin in R.

getGroupSummary

R Documentation

Get summary for Groups in ArchRProject

This function summarizes a numeric cellColData entry across groupings in a ArchRProject.

getGroupSummary(
  ArchRProj = NULL,
  groupBy = "Sample",
  select = "TSSEnrichment",
  summary = "median",
  removeNA = TRUE
)

`ArchRProj`	An `ArchRProject` object.
`groupBy`	The name of the column in `cellColData` to use for grouping multiple cells together for summarizing information.
`select`	A character vector containing the column names to select from `cellColData`.
`summary`	A character vector describing which method for summarizing across group. Options include "median", "mean", or "sum".
`removeNA`	Remove NA's from summary method.