import10xFeatureMatrix: Import Feature Matrix from 10x Feature HDF5 file.

In haibol2016/ArchR_debug: Analyzing single-cell regulatory chromatin in R.

Import Feature Matrix from 10x Feature HDF5 file.

Description

This function will import the feature matrix from a 10x feature hdf5 file.

Usage

import10xFeatureMatrix(
  input = NULL,
  names = NULL,
  featureType = "Gene Expression"
)

Arguments

input	A character of paths to 10x feature hdf5 file(s). These will traditionally have a suffix similar to "filtered_feature_bc_matrix.h5".
names	A character of sample names associated with each input file.
featureType	The name of the feature to extract from the 10x feature file. See https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/advanced/h5_matrices for more information.

haibol2016/ArchR_debug documentation built on June 15, 2022, 5:42 p.m.